1) If you don’t plan to use custom product card layout created using WPBakery grid builder then don’t choose Custom in Theme Options > WooCommerce > Shop > Product styles > Product Content Effect.
2) I see that you also installed Elementor page builder in addition. Do you plan to use 2-page builders on your site at the same time? Keep in mind that it will slow down the site! We would recommend you to choose one of them and disable the other one.
3) To keep the only one wishlist icon the following options should be set in Wishlist plugin settings https://xstore.helpscoutdocs.com/article/102-wishlist Check now.
4) To remove Compare I just disabled YITH Compare plugin.
One standard license is valid only for 1 project. Running multiple projects on a single license is a copyright violation.